Searching for Pathway for Morinda officinalis genomes


The Morinda officinalis Genome and Multiomics Database (PGMD) provides a comprehensive consultation service about Morinda officinalis associated high quality sequence, annotation, gene expression, miRNA, proteome and metabolism data. For this database, the genome sequence and annotation of the pitaya chromosomes is available through search pages, Genome Browser while the gene expression and multiomics data are presented through various forms of diagrams.

Pathway Description
map00010 Glycolysis / Gluconeogenesis
map00020 Citrate cycle (TCA cycle)
map00030 Pentose phosphate pathway
map00040 Pentose and glucuronate interconversions
map00051 Fructose and mannose metabolism
map00052 Galactose metabolism
map00053 Ascorbate and aldarate metabolism
map00061 Fatty acid biosynthesis
map00062 Fatty acid elongation
map00071 Fatty acid degradation
map00072 Synthesis and degradation of ketone bodies
map00073 Cutin, suberine and wax biosynthesis
map00100 Steroid biosynthesis
map00130 Ubiquinone and other terpenoid-quinone biosynthesis
map00140 Steroid hormone biosynthesis
map00190 Oxidative phosphorylation
map00220 Urea cycle and metabolism of amino groups
map00230 Purine metabolism
map00240 Pyrimidine metabolism
map00250 Alanine, aspartate and glutamate metabolism
map00260 Glycine, serine and threonine metabolism
map00270 Cysteine and methionine metabolism
map00280 Valine, leucine and isoleucine degradation
map00290 Valine, leucine and isoleucine biosynthesis
map00300 Lysine biosynthesis
map00310 Lysine degradation
map00330 Arginine and proline metabolism
map00340 Histidine metabolism
map00350 Tyrosine metabolism
map00360 Phenylalanine metabolism
map00380 Tryptophan metabolism
map00400 Phenylalanine, tyrosine and tryptophan biosynthesis
map00410 beta-Alanine metabolism
map00430 Taurine and hypotaurine metabolism
map00440 Phosphonate and phosphinate metabolism
map00450 Selenocompound metabolism
map00460 Cyanoamino acid metabolism
map00471 D-Glutamine and D-glutamate metabolism
map00472 D-Arginine and D-ornithine metabolism
map00480 Glutathione metabolism
map00500 Starch and sucrose metabolism
map00510 N-Glycan biosynthesis
map00520 Amino sugar and nucleotide sugar metabolism
map00524 Neomycin, kanamycin and gentamicin biosynthesis
map00531 Glycosaminoglycan degradation
map00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
map00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
map00561 Glycerolipid metabolism
map00562 Inositol phosphate metabolism
map00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
map00564 Glycerophospholipid metabolism
map00565 Ether lipid metabolism
map00590 Arachidonic acid metabolism
map00591 Linoleic acid metabolism
map00592 alpha-Linolenic acid metabolism
map00600 Sphingolipid metabolism
map00620 Pyruvate metabolism
map00630 Glyoxylate and dicarboxylate metabolism
map00640 Propanoate metabolism
map00650 Butanoate metabolism
map00660 C5-Branched dibasic acid metabolism
map00670 One carbon pool by folate
map00680 Methane metabolism
map00710 Carbon fixation in photosynthetic organisms
map00720 Carbon fixation pathways in prokaryotes
map00730 Thiamine metabolism
map00740 Riboflavin metabolism
map00750 Vitamin B6 metabolism
map00760 Nicotinate and nicotinamide metabolism
map00770 Pantothenate and CoA biosynthesis
map00780 Biotin metabolism
map00785 Lipoic acid metabolism
map00790 Folate biosynthesis
map00791 Aminobenzoate degradation
map00830 Retinol metabolism
map00860 Porphyrin and chlorophyll metabolism
map00900 Terpenoid backbone biosynthesis
map00901 Indole alkaloid biosynthesis
map00902 Monoterpenoid biosynthesis
map00903 Limonene and pinene degradation
map00904 Diterpenoid biosynthesis
map00905 Brassinosteroid biosynthesis
map00906 Carotenoid biosynthesis
map00908 Zeatin biosynthesis
map00909 Sesquiterpenoid and triterpenoid biosynthesis
map00910 Nitrogen metabolism
map00920 Sulfur metabolism
map00930 Caprolactam degradation
map00940 Phenylpropanoid biosynthesis
map00941 Flavonoid biosynthesis
map00942 Anthocyanin biosynthesis
map00943 Isoflavonoid biosynthesis
map00944 Flavone and flavonol biosynthesis
map00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
map00950 Isoquinoline alkaloid biosynthesis
map00960 Tropane, piperidine and pyridine alkaloid biosynthesis
map00965 Betalain biosynthesis
map00966 Glucosinolate biosynthesis
map00970 Aminoacyl-tRNA biosynthesis
map00980 Metabolism of xenobiotics by cytochrome P450
map00982 Drug metabolism - cytochrome P450
map00983 Drug metabolism - other enzymes
map00984 Steroid degradation
map01040 Biosynthesis of unsaturated fatty acids
map01051 Biosynthesis of ansamycins
map01052 Type I polyketide structures
map01053 Biosynthesis of siderophore group nonribosomal peptides
map01054 Nonribosomal peptide structures
map01055 Biosynthesis of vancomycin group antibiotics
map01056 Biosynthesis of type II polyketide backbone
map01057 Biosynthesis of type II polyketide products
map01058 Acridone alkaloid biosynthesis
map01059 Prenol lipid biosynthesis
map01060 Biosynthesis of plant secondary metabolites
map01061 Biosynthesis of phenylpropanoids
map01062 Biosynthesis of terpenoids and steroids
map01063 Biosynthesis of alkaloids derived from shikimate pathway
map01064 Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid
map01065 Biosynthesis of alkaloids derived from histidine and purine
map01066 Biosynthesis of alkaloids derived from terpenoid and polyketide
map01070 Biosynthesis of plant hormones
map01100 Metabolic pathways
map01110 Biosynthesis of secondary metabolites
map01120 Microbial metabolism in diverse environments
map01200 Carbon metabolism
map01210 2-Oxocarboxylic acid metabolism
map01212 Fatty acid metabolism
map01220 Degradation of aromatic compounds
map01230 Biosynthesis of amino acids
map01240 Biosynthesis of cofactors
map01521 EGFR tyrosine kinase inhibitor resistance
map01522 Endocrine resistance
map01523 Antifolate resistance
map01524 Platinum drug resistance
map01525 ALK resistance
map02010 ABC transporters
map02020 Two-component system
map02030 Bacterial chemotaxis
map02040 Flagellar assembly
map02060 Phosphotransferase system (PTS)
map03010 Ribosome
map03013 RNA transport
map03015 mRNA surveillance pathway
map03018 RNA degradation
map03020 RNA polymerase
map03022 Basal transcription factors
map03030 DNA replication
map03040 Spliceosome
map03050 Proteasome
map03060 Protein export
map03320 PPAR signaling pathway
map03410 Base excision repair
map03420 Nucleotide excision repair
map03430 Mismatch repair
map03440 Homologous recombination
map03450 Non-homologous end-joining
map03460 Fanconi anemia pathway
map04010 MAPK signaling pathway
map04012 ErbB signaling pathway
map04014 Ras signaling pathway
map04015 Rap1 signaling pathway
map04020 Calcium signaling pathway
map04022 cGMP-PKG signaling pathway
map04024 cAMP signaling pathway
map04060 Cytokine-cytokine receptor interaction
map04062 Chemokine signaling pathway
map04064 NF-kappa B signaling pathway
map04066 HIF-1 signaling pathway
map04068 FoxO signaling pathway
map04070 Phosphatidylinositol signaling system
map04071 Sphingolipid signaling pathway
map04072 Phospholipase D signaling pathway
map04080 Neuroactive ligand-receptor interaction
map04110 Cell cycle
map04114 Oocyte meiosis
map04115 p53 signaling pathway
map04120 Ubiquitin mediated proteolysis
map04122 Sulfur relay system
map04130 SNARE interactions in vesicular transport
map04140 Regulation of autophagy
map04141 Protein processing in endoplasmic reticulum
map04142 Lysosome
map04144 Endocytosis
map04145 Phagosome
map04146 Peroxisome
map04150 mTOR signaling pathway
map04151 PI3K-Akt signaling pathway
map04152 AMPK signaling pathway
map04210 Apoptosis
map04211 Longevity regulating pathway
map04213 Longevity regulating pathway - multiple species
map04215 Apoptosis - multiple species
map04216 Ferroptosis
map04217 Necroptosis
map04218 Cellular senescence
map04260 Cardiac muscle contraction
map04261 Adrenergic signaling in cardiomyocytes
map04270 Vascular smooth muscle contraction
map04310 Wnt signaling pathway
map04330 Notch signaling pathway
map04340 Hedgehog signaling pathway
map04350 TGF-beta signaling pathway
map04360 Axon guidance
map04370 VEGF signaling pathway
map04380 Osteoclast differentiation
map04390 Hippo signaling pathway
map04392 Hippo signaling pathway - multiple species
map04510 Focal adhesion
map04512 ECM-receptor interaction
map04514 Cell adhesion molecules (CAMs)
map04520 Adherens junction
map04530 Tight junction
map04540 Gap junction
map04550 Signaling pathways regulating pluripotency of stem cells
map04610 Complement and coagulation cascades
map04611 Platelet activation
map04612 Antigen processing and presentation
map04614 Renin-angiotensin system
map04620 Toll-like receptor signaling pathway
map04621 NOD-like receptor signaling pathway
map04622 RIG-I-like receptor signaling pathway
map04623 Cytosolic DNA-sensing pathway
map04625 C-type lectin receptor signaling pathway
map04630 Jak-STAT signaling pathway
map04640 Hematopoietic cell lineage
map04650 Natural killer cell mediated cytotoxicity
map04660 T cell receptor signaling pathway
map04662 B cell receptor signaling pathway
map04664 FC epsilon RI signaling pathway
map04666 FC gamma R-mediated phagocytosis
map04668 TNF signaling pathway
map04670 Leukocyte transendothelial migration
map04672 Intestinal immune network for IgA production
map04710 Circadian rhythm
map04713 Circadian entrainment
map04714 Thermogenesis
map04720 Long-term potentiation
map04721 Synaptic vesicle cycle
map04722 Neurotrophin signaling pathway
map04723 Retrograde endocannabinoid signaling
map04724 Glutamatergic synapse
map04725 Cholinergic synapse
map04726 Serotonergic synapse
map04727 GABAergic synapse
map04728 Dopaminergic synapse
map04730 Long-term depression
map04740 Olfactory transduction
map04742 Taste transduction
map04744 Phototransduction
map04750 Inflammatory mediator regulation of TRP channels
map04810 Regulation of actin cytoskeleton
map04910 Insulin signaling pathway
map04911 Insulin secretion
map04912 GnRH signaling pathway
map04913 Ovarian steroidogenesis
map04914 Progesterone-mediated oocyte maturation
map04915 Estrogen signaling pathway
map04916 Melanogenesis
map04917 Prolactin signaling pathway
map04918 Thyroid hormone synthesis
map04919 Thyroid hormone signaling pathway
map04920 Adipocytokine signaling pathway
map04921 Oxytocin signaling pathway
map04922 Glucagon signaling pathway
map04923 Regulation of lipolysis in adipocytes
map04924 Renin secretion
map04925 Aldosterone synthesis and secretion
map04926 Relaxin signaling pathway
map04927 Cortisol synthesis and secretion
map04928 Parathyroid hormone synthesis, secretion and action
map04929 Gastrin secretion
map04930 Type II diabetes mellitus
map04931 Insulin resistance
map04932 Non-alcoholic fatty liver disease (NAFLD)
map04933 AGE-RAGE signaling pathway in diabetic complications
map04934 Cushing syndrome
map04935 Growth hormone synthesis, secretion and action
map04936 Amyotrophic lateral sclerosis (ALS)
map04940 Type I diabetes mellitus
map04941 Endometrial cancer
map04942 Salivary secretion
map04943 Neuroactive ligand-receptor interaction
map04944 Fluid shear stress and atherosclerosis
map04945 Phototransduction
map04946 Phototransduction - fly
map04950 Maturity onset diabetes of the young
map04951 MAPK signaling pathway - fly
map04952 Ionotropic glutamate receptor pathway
map04953 Metabolic pathways
map04954 Cellular senescence
map04955 Endocrine resistance
map04956 Leukocyte transendothelial migration
map04957 Estrogen signaling pathway
map04958 Aldosterone synthesis and secretion
map04959 Renin secretion
map04960 Protein processing in endoplasmic reticulum
map04961 Endocrine and other factor-regulated calcium reabsorption
map04962 Vasopressin-regulated water reabsorption
map04963 Corticotropin-releasing hormone (CRH) signaling pathway
map04964 Proximal tubule bicarbonate reclamation
map04965 Glucagon signaling pathway
map04966 Collecting duct acid secretion
map04970 Salivary secretion
map04971 Gastric acid secretion
map04972 Insulin secretion
map04973 Carbohydrate digestion and absorption
map04974 Protein digestion and absorption
map04975 Fat digestion and absorption
map04976 Bile secretion
map04977 Vitamin digestion and absorption
map04978 Mineral absorption
map05010 Alzheimer's disease
map05012 Parkinson's disease
map05014 Amyotrophic lateral sclerosis (ALS)
map05016 Huntingtons disease
map05020 Prion diseases
map05030 Cocaine addiction
map05031 Amphetamine addiction
map05032 Morphine addiction
map05033 Nicotine addiction
map05034 Alcoholism
map05100 Bacterial invasion of epithelial cells
map05110 Vibrio cholerae infection
map05120 Epithelial cell signaling in Helicobacter pylori infection
map05130 Pathogenic Escherichia coli infection
map05131 Shigellosis
map05132 Salmonella infection
map05133 Pertussis
map05134 Legionellosis
map05140 Leishmaniasis
map05142 Chagas disease (American trypanosomiasis)
map05143 African trypanosomiasis
map05144 Malaria
map05145 Toxoplasmosis
map05146 Amoebiasis
map05150 Staphylococcus aureus infection
map05152 Tuberculosis
map05160 Hepatitis C
map05161 Hepatitis B
map05162 Measles
map05163 Human cytomegalovirus infection
map05164 Influenza A
map05165 Human papillomavirus infection
map05166 HTLV-I infection
map05168 Herpes simplex infection
map05169 Epstein-Barr virus infection
map05200 Pathways in cancer
map05202 Transcriptional misregulation in cancer
map05203 Viral carcinogenesis
map05204 Chemical carcinogenesis
map05205 Proteoglycans in cancer
map05206 MicroRNAs in cancer
map05210 Colorectal cancer
map05211 Renal cell carcinoma
map05212 Pancreatic cancer
map05213 Endometrial cancer
map05214 Glioma
map05215 Prostate cancer
map05216 Thyroid cancer
map05217 Basal cell carcinoma
map05218 Melanoma
map05219 Bladder cancer
map05220 Chronic myeloid leukemia
map05221 Acute myeloid leukemia
map05217 Basal cell carcinoma
map05218 Melanoma
map05219 Bladder cancer
map05220 Chronic myeloid leukemia
map05221 Acute myeloid leukemia
map05222 Small cell lung cancer
map05223 Non-small cell lung cancer
map05230 Central carbon metabolism in cancer
map05231 Choline metabolism in cancer
map05322 Systemic lupus erythematosus
map05323 Rheumatoid arthritis
map05340 Primary immunodeficiency
map05410 Hypertrophic cardiomyopathy (HCM)
map05412 Arrhythmogenic right ventricular cardiomyopathy (ARVC)
map05414 Dilated cardiomyopathy
map05416 Viral myocarditis